The outline of a person sits down next to a bunch of grapes and a slice of watermelon.

The Inner Lives of Fruit Flies

WORDS BY SOFIA QUAGLIA

artwork by yannick lowery

The pestering insects have taught science so much about humanity. What if we valued them for their own worth, too?

They buzz around ripe peaches on warm summer nights; they fly into our eyes as we bike along wooded trails; they land in our sweet alcoholic beverages as we watch the sun set on our porch chairs. To most, fruit flies are pests—targets of the vinegar-dish soap traps we jerry-rig and set on our kitchen counters. But to scientists, they’re so much more: Fruit flies are mirrors of the human experience. 

 

Studies on Drosophila have uncovered fundamental principles of basic biology, yielded critical insights about human health and medicine, and now, even tackle questions as profound as what it means to be human.

 

Science has always focused on what the fly might teach us about ourselves. But in the process, it’s become evident that these tiny insects have rich lives of their own—lives worth knowing about. They count and make decisions, enjoy sex and read social cues. Turns out, they might even play. A new wave of scientists is beginning to appreciate the flies not for what they teach us about ourselves but for their own inner lives. Researchers are “politically more inclined to look at questions that they wouldn’t have dared to look into maybe 10 years ago,” said Wolf Huetteroth, a fruit fly researcher at the University of Leipzig. And if they’re making these grand discoveries in a puny pest—feats only discovered because Drosophila, largely by fortuity, became model systems in biology a century ago—imagine what other truths might be hiding among us just waiting to be discovered. 

***

Thomas Hunt Morgan, a biologist at Columbia University in New York, started researching Drosophila melanogaster because they were cheap and easy to work with. Nothing pointed to them having uniquely exceptional traits. 

 

In his lab in 1910, well before scientists knew what DNA was, he extracted chromosomes from Drosophila and analyzed how genes could be passed on through generations. Thanks to these discoveries establishing genetics as a scientific discipline, he won the Nobel Prize in 1933. British researchers soon followed suit, launching the first fly facility in Cambridge, rearing hundreds of flies in empty glass milk bottles, and studying how genes control physical traits.

 

“To some extent, it’s happenstance” that fruit flies became a research subject, said Elizabeth Gavis, a professor of molecular biology at Princeton University.

 

But all of these scientists were onto something. Fruit flies are convenient to study because they’re small, easy to handle and store, and reproduce quickly. They can lay up to 30 to 50 eggs a day which hatch within two weeks. That makes them grandparents in less than a month, and researchers have entire family trees in much less time than working with, say, mice. Fruit flies also only have four pairs of chromosomes, three of which handle most of the coding genes. Compared to mice which have 20 pairs, it’s much easier to track genetic changes in Drosophila, according to Gavis.

“They are incredibly sophisticated and marvelous creatures.”

Steven Russel
Head of the department of genetics, University of Cambridge

Today, we know more about Drosophila than most other animals on this planet. Scientists decoded its full genome as well as a complete connectome of all the neurons in its brain. They can tweak the mapped-out genetic and neural components, allowing them to ask the big, fundamental questions about how organisms work.

 

“We want to understand the basic biology of how cells work, of how cells are organized into tissues, of how things like, you know, a brain work,” said Gavis. 

 

Since Morgan, fruit flies have brought nine other scientists a total of five Nobel prizes. Experiments on fruit flies have helped us understand how X-rays cause mutations in genes, how genes tell cells how to develop into embryonic cells, how an animal’s innate immune system is triggered, and how the circadian clock works inside cells. The discoveries in Drosophila teach us about the many animals that separate humans and flies on the tree of life and what unites us as animals of planet Earth. 

 

After all, we are all more alike than we might think. 

***

Our similarities with fruit flies reach deep into the genetic level. 60% of fruit fly genes can be found in people, and 75% of the genes implicated in human diseases are found in fruit flies. That makes them a perfect model to tackle questions about human health, according to Steven Russel, head of the department of genetics at the University of Cambridge. 

 

He works in that original Fly Facility at Cambridge, which has now become internationally renowned. In two temperature-controlled rooms—one at 18°C and one at 25°C—the Fly Facility houses more than 60,000 tubes homing millions of Drosophila with all sorts of different mutations for different behaviors or physical appearances. Every morning, a lab member comes in early to prepare over 100 liters of fly food in a gigantic kettle. Thankfully, they have a simple taste: A mix of cornmeal, sugar, yeast, and agar will do.

 

“You can do incredibly sophisticated things with flies,” said Russell. “You can get them addicted to alcohol, you can get them addicted to cocaine, you know, find genes that are responsible for that underlying sin.”

 

Like humans, fruit flies have been found to use alcohol to self-medicate and enjoy sex. Since coffee keeps flies awake and older flies tend to sleep less, fruit flies have been used to study sleep—research on fruit flies has detected the genes that make us hungry when we’re sleep-deprived. It’s even possible to insert human genes into a fly’s genome and observe how it takes over the function of the insect, according to Russell. Drosophila have helped researchers understand epilepsy and seizures, understand the genetic origin of Alzheimer’s, and unpack how cancer cells spur. In fact, fruit flies are often used to screen and test new drugs for humans. They are even studied in space.

 

“Anyone [who has spent] any small amount of time, working and looking at flies, it is no surprise to any of us—they are incredibly sophisticated and marvelous creatures,” said Russell.

 

The more scientists have learned about fruit flies, the more they’ve been humbled by all the complex feats they’re capable of. Drosophila, it seems, live a rich, kaleidoscopic inner life. And scientists are now appreciating this beyond its human application. 

 

“They have inner cognitive processes that are happening that are really interesting to study in themselves,” said Clara Howcroft Ferreira, a neuroscience professor at Northumbria University in the United Kingdom. 

 

When asked to distinguish between two odors, for instance, fruit flies take longer to choose the more similar the two are. In this experiment, fruit flies display “a hallmark of perceptual decision-making,” said Ferreira. It signifies a cognitively complex choice where tougher decisions take longer, rather than the popular belief of an instinctive reaction. It’s not too different, Ferreira said, to when she decided to move to London for her new job: starting over, moving the kids. “It took me quite a while to come to the decision, to measure the pros and cons,” said Ferreira. “And then basically realizing that flies also do this, this is really exciting.” 

 

Fruit flies also read cues from the other individuals they’re with to aid their decision-making, according to Ferreira’s latest research. When threatened with an incoming dark disk (resembling being swatted), flies on their lonesome froze. But in groups of two to 10, they were less likely to freeze, as if their fear was buffered by the social context. They also were more likely to resume flying if their peers did, seemingly understanding a social cue for safety. 

We see fruit flies as pests…but imagine, just for a moment, the world through their eyes.

Ferreira’s colleagues were skeptical when she started looking into the social behaviors of fruit flies, suggesting that bees, ants, and other insects with known social hierarchies would be more suitable. But her findings have proven them wrong. “They’re actually really integrating information of what these other ones around them are doing to guide their responses,” said Ferreira. “It’s really quite complex, the group structure that they have.”

 

Flies might even play, according to Huetteroth—exactly what scientists wouldn’t have dared to ask a decade ago. 

 

The German scientist built a miniature carousel for fruit flies. The spinning platform causes them to lose control—something animals normally wouldn’t love experiencing. “I did not really expect that the fly would go on the carousel at all. I really thought that they would just avoid it,” said Huetteroth. But, to his surprise, several of the flies did take it for a spin. Even after being tossed off the contraption, they came back the next day, and the day after that, knowing full well what it would entail. And they demonstrated individual responses to the machine—some seemed to love it, others to hate it.

 

To him, this clearly suggests the flies are enjoying themselves, with no real end goal, a feat we’ve long been reserving for cognitively complex creatures. Although no one would challenge the notion that a dog is playing, Huetteroth said, “We’re not quite at the point yet that the whole community is convinced.” 

 

His research still hasn’t been peer-reviewed, and he’s struggling to get it published in a journal. He’s working on further experiments to look at whether neurons responsible for enjoyment light up when fruit flies ride the carousel, which would pinpoint that they’re having fun at the biological level. 

 

“I think fruit flies do have an amazing inner life,” said Huetteroth, one worth shifting many of the long-held paradigms in how we understand the world. 

 

For over a century, the fruit fly has been held up as a mirror to ourselves. There is some humility in acknowledging our similarities; we share so much with our animal kin, down to the tiniest of insects. Still, in that framing, there remains an implied hierarchy, a subtle exploitation where value is defined by human gain. 

 

Some scientists like Huetteroth are beginning to grasp the inner lives of flies not for our sake, but for theirs—studies leaning into somewhat the psychology of fruit flies might be the next frontier. That, he said, is yielding huge intellectual breakthroughs. 

 

How would the world look if, like these scientists, all humans stepped off their pedestals? If we cared about creatures not for what they give us, but for their intrinsic value? Would we be more compassionate and caring, more open-minded and empathetic? 

 

Even more radically, how would decentering ourselves change how we treat nature and our planet? We see fruit flies as pests—as nuisances that inconvenience and challenge our summer barbecues, our outdoor happy hours, our human lives. But imagine, just for a moment, the world through their eyes—through the eyes of the millions of animal species on our planet, through the leaves of the trees we’ve burned to the ground, through the mycelium of the mushrooms whose land we mine and sow, insatiable humans feasting in the fruits of Earth. Wouldn’t they think the same about us?


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The Inner Lives of Fruit Flies

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